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leeHom

Bayesian reconstruction of ancient DNA

https://github.com/grenaud/leeHom

leeHom is a Bayesian maximum a posteriori algorithm for stripping sequencing adapters and merging overlapping portions of reads. The algorithm is mostly aimed at ancient DNA and Illumina data but can be used for any dataset.

File search patterns​

leehom:
  contents: Adapter dimers/chimeras
  num_lines: 100