Skip to main content

Slamdunk

Tool to analyze SLAM-Seq data

http://t-neumann.github.io/slamdunk/

This module should be able to parse logs from v0.2.2-dev onwards.

File search patterns​

slamdunk/PCA:
  contents: "# slamdunk PCA"
  num_lines: 1
slamdunk/rates:
  contents: "# slamdunk rates"
  num_lines: 1
slamdunk/summary:
  contents: "# slamdunk summary"
  num_lines: 1
slamdunk/tcperreadpos:
  contents: "# slamdunk tcperreadpos"
  num_lines: 1
slamdunk/tcperutrpos:
  contents: "# slamdunk tcperutr"
  num_lines: 1
slamdunk/utrrates:
  contents: "# slamdunk utrrates"
  num_lines: 1