mirtop
Annotates miRNAs and isomiRs and compute general statistics in mirGFF3 format
This tool is dedicated to the creation and management of miRNA alignment output using the standardized GFF3 format (see miRTop/mirGFF3). A unified miRNA alignment format allows to easily compare the output of different alignment tools. Currently, mirtop can convert into mirGFF3 the outputs of commonly used pipelines, such as seqbuster, isomiR-SEA, sRNAbench, Prost! as well as BAM files.
File search patterns
mirtop:
fn: "*_mirtop_stats.log"