PRINSEQ++

C++ implementation of the prinseq-lite.pl program. Filters, reformats, and trims genomic and metagenomic reads

https://github.com/Adrian-Cantu/PRINSEQ-plus-plus

This module requires that PRINSEQ++ has been run with the flag -VERBOSE 1.

It uses the log file name as the sample name.

File search patterns

prinseqplusplus:
  - contents: reads removed by -
    num_lines: 2