SnpEff

Annotates and predicts the effects of variants on genes (such as amino acid changes)

http://snpeff.sourceforge.net/

MultiQC parses the summary .csv file that is generated by SnpEff. Note that you must run SnpEff with -csvStats <filename> for this to be generated. See the SnpEff documentation for more information.

File search patterns

snpeff:
  contents: SnpEff_version
  max_filesize: 5000000