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pbmarkdup

Takes one or multiple sequencing chips of an amplified libray as HiFi reads and marks or removes duplicates

https://github.com/PacificBiosciences/pbmarkdup

The module adds the % Unique Molecules and %Duplicate Reads (hidden) to the General Statistics table.

File search patterns​

pbmarkdup:
  contents_re: LIBRARY +READS +UNIQUE MOLECULES +DUPLICATE READS
  num_lines: 5